Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 AC233723.2-201ENST00000623798 2106 ntBASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 ECEL1P1-201ENST00000373592 1742 ntBASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZFYVE28Q9HCC9 PHGDH-210ENST00000641115 1638 ntBASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 AC012313.10-201ENST00000623509 926 ntBASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
ZFYVE28Q9HCC9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZFYVE28Q9HCC9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 AL024507.2-201ENST00000606070 2574 ntBASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 AP000523.1-201ENST00000398242 1049 ntBASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 AC112907.2-201ENST00000448639 330 ntBASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 ZNF444P1-201ENST00000559497 298 ntBASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.47■■□□□ 1.19
ZFYVE28Q9HCC9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.46■■□□□ 1.19
ZFYVE28Q9HCC9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms