Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HES4Q9HCC6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.59■□□□□ 0.25
HES4Q9HCC6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 RPS2P52-201ENST00000469610 820 ntBASIC16.59■□□□□ 0.25
HES4Q9HCC6 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.59■□□□□ 0.25
HES4Q9HCC6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HES4Q9HCC6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.59■□□□□ 0.25
HES4Q9HCC6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.58■□□□□ 0.25
HES4Q9HCC6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HES4Q9HCC6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HES4Q9HCC6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.58■□□□□ 0.25
HES4Q9HCC6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.58■□□□□ 0.24
HES4Q9HCC6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HES4Q9HCC6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 AC124283.5-201ENST00000624661 1809 ntBASIC16.57■□□□□ 0.24
HES4Q9HCC6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 AC120498.8-201ENST00000614275 531 ntBASIC16.57■□□□□ 0.24
HES4Q9HCC6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HES4Q9HCC6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.57■□□□□ 0.24
HES4Q9HCC6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HES4Q9HCC6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HES4Q9HCC6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.56■□□□□ 0.24
HES4Q9HCC6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HES4Q9HCC6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.56■□□□□ 0.24
HES4Q9HCC6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HES4Q9HCC6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HES4Q9HCC6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HES4Q9HCC6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms