Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 MIR1224-201ENST00000408193 85 ntBASIC22.91■■□□□ 1.26
SH2D4AQ9H788 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.91■■□□□ 1.26
SH2D4AQ9H788 DGCR10-201ENST00000609839 495 ntBASIC22.91■■□□□ 1.26
SH2D4AQ9H788 MIR6786-201ENST00000616843 113 ntBASIC22.91■■□□□ 1.26
SH2D4AQ9H788 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SH2D4AQ9H788 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 NAPSB-206ENST00000562112 1266 ntBASIC22.9■■□□□ 1.26
SH2D4AQ9H788 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SH2D4AQ9H788 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 AP001271.2-201ENST00000624018 1556 ntBASIC22.89■■□□□ 1.26
SH2D4AQ9H788 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SH2D4AQ9H788 AC020907.5-201ENST00000624372 1936 ntBASIC22.89■■□□□ 1.25
SH2D4AQ9H788 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 AC004980.1-204ENST00000429707 299 ntBASIC22.89■■□□□ 1.25
SH2D4AQ9H788 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.89■■□□□ 1.25
SH2D4AQ9H788 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
SH2D4AQ9H788 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SH2D4AQ9H788 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 TMEM179-206ENST00000616017 1645 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 RCN1P1-201ENST00000400413 996 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 AL390955.1-201ENST00000428694 934 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 B3GAT3P1-201ENST00000471720 806 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 KRT8P9-201ENST00000558927 1449 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 LINC01568-207ENST00000641790 1380 ntBASIC22.87■■□□□ 1.25
SH2D4AQ9H788 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SH2D4AQ9H788 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 MESTP1-201ENST00000404287 994 ntBASIC22.86■■□□□ 1.25
SH2D4AQ9H788 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.86■■□□□ 1.25
SH2D4AQ9H788 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms