Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3AQ9H492 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 LTB4R2-202ENST00000528054 3092 ntBASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 CROCCP3-202ENST00000420820 1947 ntBASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 AC133561.4-201ENST00000566112 224 ntBASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MAP1LC3AQ9H492 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 MIR3621-201ENST00000580529 85 ntBASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MAP1LC3AQ9H492 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms