Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 AC005521.1-201ENST00000393351 872 ntBASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 AC004951.3-201ENST00000418645 1148 ntBASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC29.67■■■□□ 2.34
PTPN23Q9H3S7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 AC092667.1-201ENST00000434301 2586 ntBASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 NME1-207ENST00000480143 964 ntTSL 2 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 AC097488.1-201ENST00000507834 756 ntBASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 TCF3P1-201ENST00000423021 1937 ntBASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
PTPN23Q9H3S7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 AC008040.2-201ENST00000461049 708 ntBASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 AC091390.4-202ENST00000476426 537 ntBASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC29.65■■■□□ 2.34
PTPN23Q9H3S7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 AC073508.3-201ENST00000619697 1419 ntBASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTPN23Q9H3S7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.33
PTPN23Q9H3S7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 FAM207BP-201ENST00000447172 505 ntBASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 MFAP1P1-201ENST00000442257 1255 ntBASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 AP000692.2-201ENST00000608391 879 ntBASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
PTPN23Q9H3S7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 LINC01465-201ENST00000408887 1940 ntBASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 TSPY14P-201ENST00000303979 915 ntBASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PTPN23Q9H3S7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
PTPN23Q9H3S7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTPN23Q9H3S7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC29.61■■■□□ 2.33
PTPN23Q9H3S7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms