Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC12.12□□□□□ -0.47
KRTAP3-3Q9BYR6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
KRTAP3-3Q9BYR6 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KRTAP3-3Q9BYR6 REST-210ENST00000638187 1334 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC093323.1-202ENST00000635031 2045 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 RNY3P14-201ENST00000384309 102 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 RPL22P22-201ENST00000395439 379 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 ARL4AP5-201ENST00000404372 599 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 TDGF1P2-201ENST00000413322 562 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 PTP4A1P5-201ENST00000420305 455 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AP001342.1-201ENST00000423389 525 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AL034418.1-201ENST00000448675 860 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 SYT14P1-201ENST00000481459 721 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC109464.2-201ENST00000510242 943 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 SUCLG2P4-201ENST00000514739 1027 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC008127.2-201ENST00000549925 1075 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AL031281.1-201ENST00000604049 488 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 AC025048.6-201ENST00000634326 1161 ntBASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
KRTAP3-3Q9BYR6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 MORN2-202ENST00000409077 465 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 NPM1P24-201ENST00000428039 894 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 KCTD9P3-201ENST00000434597 1169 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC103591.1-201ENST00000448345 556 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AL096803.2-201ENST00000450032 677 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 CLIC4P1-201ENST00000453177 535 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC074051.1-201ENST00000470389 781 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC004263.1-201ENST00000479327 332 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC021193.1-201ENST00000511607 420 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 KATNBL1P1-201ENST00000605192 748 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AL365330.1-201ENST00000607459 531 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AL136295.7-201ENST00000619226 1200 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC104985.2-201ENST00000620598 500 ntBASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 AC091167.7-201ENST00000622269 518 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 LINC00969-272ENST00000626569 857 ntTSL 5 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP3-3Q9BYR6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP3-3Q9BYR6 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms