RNA–Protein interactions for RNA: ENST00000491260.2

C1orf143-202, Transcript of chromosome 1 open reading frame 143 (putative), humanhuman

TSL 3 BASIC

Gene C1orf143, Length 813 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf143-202ENST00000491260 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
C1orf143-202ENST00000491260 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
C1orf143-202ENST00000491260 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
C1orf143-202ENST00000491260 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
C1orf143-202ENST00000491260 FOXD1Q16676 465 aa21.78■■□□□ 1.08
C1orf143-202ENST00000491260 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
C1orf143-202ENST00000491260 PPP6R1Q9UPN7 881 aa20.77■□□□□ 0.92
C1orf143-202ENST00000491260 ADRA2BP18089 450 aa20.69■□□□□ 0.9
C1orf143-202ENST00000491260 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
C1orf143-202ENST00000491260 MSH5O43196 834 aa20.13■□□□□ 0.81
C1orf143-202ENST00000491260 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
C1orf143-202ENST00000491260 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
C1orf143-202ENST00000491260 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
C1orf143-202ENST00000491260 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
C1orf143-202ENST00000491260 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
C1orf143-202ENST00000491260 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
C1orf143-202ENST00000491260 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
C1orf143-202ENST00000491260 HOXD11P31277 338 aaPredicted RBP18.15■□□□□ 0.5
C1orf143-202ENST00000491260 KCNA4P22459 653 aa18.13■□□□□ 0.49
C1orf143-202ENST00000491260 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
C1orf143-202ENST00000491260 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
C1orf143-202ENST00000491260 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
C1orf143-202ENST00000491260 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
C1orf143-202ENST00000491260 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
C1orf143-202ENST00000491260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
C1orf143-202ENST00000491260 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
C1orf143-202ENST00000491260 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
C1orf143-202ENST00000491260 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
C1orf143-202ENST00000491260 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
C1orf143-202ENST00000491260 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
C1orf143-202ENST00000491260 ZBTB22O15209 634 aa16.72■□□□□ 0.27
C1orf143-202ENST00000491260 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
C1orf143-202ENST00000491260 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
C1orf143-202ENST00000491260 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
C1orf143-202ENST00000491260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
C1orf143-202ENST00000491260 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
C1orf143-202ENST00000491260 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
C1orf143-202ENST00000491260 CAPN15O75808 1086 aa16.49■□□□□ 0.23
C1orf143-202ENST00000491260 APLP2Q06481 763 aa16.44■□□□□ 0.22
C1orf143-202ENST00000491260 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
C1orf143-202ENST00000491260 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
C1orf143-202ENST00000491260 DSG3P32926 999 aa16.34■□□□□ 0.21
C1orf143-202ENST00000491260 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
C1orf143-202ENST00000491260 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
C1orf143-202ENST00000491260 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
C1orf143-202ENST00000491260 ABCB7O75027 752 aa16.18■□□□□ 0.18
C1orf143-202ENST00000491260 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
C1orf143-202ENST00000491260 POLA2Q14181 598 aa16.04■□□□□ 0.16
C1orf143-202ENST00000491260 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
C1orf143-202ENST00000491260 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
C1orf143-202ENST00000491260 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
C1orf143-202ENST00000491260 FBLN2P98095 1184 aa15.51■□□□□ 0.07
C1orf143-202ENST00000491260 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
C1orf143-202ENST00000491260 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
C1orf143-202ENST00000491260 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
C1orf143-202ENST00000491260 SPDYE2Q495Y8 402 aa15.28■□□□□ 0.04
C1orf143-202ENST00000491260 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
C1orf143-202ENST00000491260 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
C1orf143-202ENST00000491260 SSUH2Q9Y2M2 353 aa15.17■□□□□ 0.02
C1orf143-202ENST00000491260 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
C1orf143-202ENST00000491260 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
C1orf143-202ENST00000491260 POTEHQ6S545 545 aa15.01□□□□□ -0.01
C1orf143-202ENST00000491260 CHRDL2Q6WN34 429 aa15.01□□□□□ -0.01
C1orf143-202ENST00000491260 PITPNM1O00562 1244 aa15□□□□□ -0.01
C1orf143-202ENST00000491260 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
C1orf143-202ENST00000491260 SPDYE1Q8NFV5 336 aaPredicted RBP14.88□□□□□ -0.03
C1orf143-202ENST00000491260 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
C1orf143-202ENST00000491260 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
C1orf143-202ENST00000491260 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
C1orf143-202ENST00000491260 PROM2Q8N271 834 aa14.77□□□□□ -0.05
C1orf143-202ENST00000491260 FKBP8Q14318 412 aa14.75□□□□□ -0.05
C1orf143-202ENST00000491260 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
C1orf143-202ENST00000491260 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
C1orf143-202ENST00000491260 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
C1orf143-202ENST00000491260 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
C1orf143-202ENST00000491260 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
C1orf143-202ENST00000491260 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
C1orf143-202ENST00000491260 HAX1O00165 279 aa14.34□□□□□ -0.11
C1orf143-202ENST00000491260 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
C1orf143-202ENST00000491260 EVX2Q03828 476 aa14.3□□□□□ -0.12
C1orf143-202ENST00000491260 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
C1orf143-202ENST00000491260 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
C1orf143-202ENST00000491260 MIER1Q8N108 512 aa14.24□□□□□ -0.13
C1orf143-202ENST00000491260 SP7Q8TDD2 431 aaPredicted RBP14.18□□□□□ -0.14
C1orf143-202ENST00000491260 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
C1orf143-202ENST00000491260 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
C1orf143-202ENST00000491260 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
C1orf143-202ENST00000491260 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
C1orf143-202ENST00000491260 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
C1orf143-202ENST00000491260 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
C1orf143-202ENST00000491260 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
C1orf143-202ENST00000491260 NUBP1P53384 320 aa13.97□□□□□ -0.17
C1orf143-202ENST00000491260 RASEFQ8IZ41 740 aa13.97□□□□□ -0.17
C1orf143-202ENST00000491260 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
C1orf143-202ENST00000491260 GABBR2O75899 941 aa13.95□□□□□ -0.18
C1orf143-202ENST00000491260 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
C1orf143-202ENST00000491260 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
C1orf143-202ENST00000491260 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
C1orf143-202ENST00000491260 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
C1orf143-202ENST00000491260 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms