Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.6■□□□□ 0.57
BBS4Q96RK4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BBS4Q96RK4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 AL355802.2-201ENST00000402069 882 ntBASIC18.59■□□□□ 0.57
BBS4Q96RK4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 AC060766.5-201ENST00000590539 871 ntBASIC18.59■□□□□ 0.57
BBS4Q96RK4 AC083880.1-201ENST00000608266 535 ntBASIC18.59■□□□□ 0.57
BBS4Q96RK4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BBS4Q96RK4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.59■□□□□ 0.57
BBS4Q96RK4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
BBS4Q96RK4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
BBS4Q96RK4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BBS4Q96RK4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS4Q96RK4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 HLA-L-209ENST00000420110 1011 ntBASIC18.58■□□□□ 0.56
BBS4Q96RK4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BBS4Q96RK4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 PNMA6B-201ENST00000538162 1200 ntBASIC18.58■□□□□ 0.56
BBS4Q96RK4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 AC142086.2-201ENST00000569753 217 ntBASIC18.58■□□□□ 0.56
BBS4Q96RK4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS4Q96RK4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 AC116351.2-201ENST00000606540 1585 ntBASIC18.58■□□□□ 0.56
BBS4Q96RK4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS4Q96RK4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.58■□□□□ 0.56
BBS4Q96RK4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS4Q96RK4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS4Q96RK4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS4Q96RK4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.56■□□□□ 0.56
BBS4Q96RK4 TREX1-205ENST00000625293 1783 ntBASIC18.56■□□□□ 0.56
BBS4Q96RK4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS4Q96RK4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS4Q96RK4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BBS4Q96RK4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 RPS2P52-201ENST00000469610 820 ntBASIC18.56■□□□□ 0.56
BBS4Q96RK4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.56■□□□□ 0.56
BBS4Q96RK4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.56■□□□□ 0.56
BBS4Q96RK4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms