Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL21A1Q96P44 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL21A1Q96P44 HLA-B-256ENST00000639848 1089 ntBASIC18.52■□□□□ 0.56
COL21A1Q96P44 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL21A1Q96P44 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL21A1Q96P44 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
COL21A1Q96P44 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL21A1Q96P44 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.51■□□□□ 0.55
COL21A1Q96P44 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL21A1Q96P44 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
COL21A1Q96P44 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.51■□□□□ 0.55
COL21A1Q96P44 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.51■□□□□ 0.55
COL21A1Q96P44 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.51■□□□□ 0.55
COL21A1Q96P44 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL21A1Q96P44 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
COL21A1Q96P44 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 AC023632.3-201ENST00000521633 145 ntBASIC18.5■□□□□ 0.55
COL21A1Q96P44 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.5■□□□□ 0.55
COL21A1Q96P44 AC060766.5-201ENST00000590539 871 ntBASIC18.5■□□□□ 0.55
COL21A1Q96P44 AL031963.3-201ENST00000606441 850 ntBASIC18.5■□□□□ 0.55
COL21A1Q96P44 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
COL21A1Q96P44 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL21A1Q96P44 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.5■□□□□ 0.55
COL21A1Q96P44 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL21A1Q96P44 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL21A1Q96P44 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 AP000974.1-201ENST00000623909 2387 ntBASIC18.49■□□□□ 0.55
COL21A1Q96P44 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 TNXA-203ENST00000507684 2038 ntBASIC18.49■□□□□ 0.55
COL21A1Q96P44 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 KRT18P6-201ENST00000555540 1265 ntBASIC18.49■□□□□ 0.55
COL21A1Q96P44 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 AC092368.3-202ENST00000574180 1591 ntBASIC18.49■□□□□ 0.55
COL21A1Q96P44 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.49■□□□□ 0.55
COL21A1Q96P44 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL21A1Q96P44 KRT16P6-202ENST00000425692 1426 ntBASIC18.49■□□□□ 0.55
COL21A1Q96P44 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 HLA-G-202ENST00000376815 851 ntBASIC18.48■□□□□ 0.55
COL21A1Q96P44 HLA-G-203ENST00000376818 1127 ntBASIC18.48■□□□□ 0.55
COL21A1Q96P44 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL21A1Q96P44 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL21A1Q96P44 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms