Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 NBPF21P-201ENST00000425093 1451 ntBASIC17.65■□□□□ 0.42
LRRC46Q96FV0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 FAM210CP-201ENST00000445714 574 ntBASIC17.65■□□□□ 0.42
LRRC46Q96FV0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 AC027702.1-201ENST00000563810 1770 ntBASIC17.65■□□□□ 0.42
LRRC46Q96FV0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC46Q96FV0 AC244015.2-201ENST00000616358 1861 ntBASIC17.65■□□□□ 0.42
LRRC46Q96FV0 KRT8P36-201ENST00000489121 1440 ntBASIC17.64■□□□□ 0.42
LRRC46Q96FV0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRC46Q96FV0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 AC113410.3-201ENST00000623366 203 ntBASIC17.64■□□□□ 0.41
LRRC46Q96FV0 MIR2861-201ENST00000636310 90 ntBASIC17.64■□□□□ 0.41
LRRC46Q96FV0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRRC46Q96FV0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 AC026471.1-201ENST00000564629 3026 ntBASIC17.63■□□□□ 0.41
LRRC46Q96FV0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms