Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AP005242.2-201ENST00000580065 1175 ntBASIC19.7■□□□□ 0.74
SIPA1Q96FS4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIPA1Q96FS4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.69■□□□□ 0.74
SIPA1Q96FS4 AC097488.1-201ENST00000507834 756 ntBASIC19.69■□□□□ 0.74
SIPA1Q96FS4 AL590326.2-201ENST00000625139 305 ntBASIC19.69■□□□□ 0.74
SIPA1Q96FS4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 SLC25A24-204ENST00000569674 2357 ntBASIC19.69■□□□□ 0.74
SIPA1Q96FS4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SIPA1Q96FS4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 TERF1P1-201ENST00000311003 1181 ntBASIC19.68■□□□□ 0.74
SIPA1Q96FS4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 CRYGFP-201ENST00000418459 633 ntBASIC19.68■□□□□ 0.74
SIPA1Q96FS4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 KRT18P35-201ENST00000510488 1269 ntBASIC19.68■□□□□ 0.74
SIPA1Q96FS4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIPA1Q96FS4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 ARMC10P1-201ENST00000313754 855 ntBASIC19.67■□□□□ 0.74
SIPA1Q96FS4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIPA1Q96FS4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 BX119927.1-201ENST00000636596 1552 ntBASIC19.66■□□□□ 0.74
SIPA1Q96FS4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SIPA1Q96FS4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms