Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RNF25Q96BH1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF25Q96BH1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF25Q96BH1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF25Q96BH1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF25Q96BH1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RNF25Q96BH1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
RNF25Q96BH1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF25Q96BH1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF25Q96BH1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF25Q96BH1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF25Q96BH1 AIRN-201ENST00000601203 4374 ntBASIC20.57■□□□□ 0.88
RNF25Q96BH1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF25Q96BH1 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 AC083906.2-201ENST00000511578 360 ntBASIC20.57■□□□□ 0.88
RNF25Q96BH1 AC005786.4-201ENST00000623369 682 ntBASIC20.57■□□□□ 0.88
RNF25Q96BH1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
RNF25Q96BH1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 MIPEPP3-201ENST00000412105 444 ntBASIC20.56■□□□□ 0.88
RNF25Q96BH1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.56■□□□□ 0.88
RNF25Q96BH1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF25Q96BH1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF25Q96BH1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 AC006970.2-201ENST00000450065 779 ntBASIC20.55■□□□□ 0.88
RNF25Q96BH1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF25Q96BH1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF25Q96BH1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms