Protein–RNA interactions for Protein: Q92954

PRG4, Proteoglycan 4, humanhuman

Predicted RBP Predictions only

Length 1,404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4Q92954 AC121338.2-201ENST00000622535 1744 ntBASIC31.37■■■□□ 2.61
PRG4Q92954 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PRG4Q92954 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRG4Q92954 GLRB-205ENST00000512619 728 ntTSL 3 BASIC31.37■■■□□ 2.61
PRG4Q92954 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PRG4Q92954 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC31.37■■■□□ 2.61
PRG4Q92954 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRG4Q92954 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRG4Q92954 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRG4Q92954 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRG4Q92954 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC31.36■■■□□ 2.61
PRG4Q92954 UNC93B7-201ENST00000509439 705 ntBASIC31.36■■■□□ 2.61
PRG4Q92954 MIR3652-201ENST00000579335 131 ntBASIC31.36■■■□□ 2.61
PRG4Q92954 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRG4Q92954 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC31.36■■■□□ 2.61
PRG4Q92954 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC31.36■■■□□ 2.61
PRG4Q92954 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRG4Q92954 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PRG4Q92954 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC31.36■■■□□ 2.61
PRG4Q92954 AC005229.4-201ENST00000610085 2198 ntBASIC31.35■■■□□ 2.61
PRG4Q92954 AC004870.1-201ENST00000315132 882 ntBASIC31.35■■■□□ 2.61
PRG4Q92954 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRG4Q92954 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRG4Q92954 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRG4Q92954 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRG4Q92954 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRG4Q92954 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC31.34■■■□□ 2.61
PRG4Q92954 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
PRG4Q92954 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRG4Q92954 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC31.34■■■□□ 2.61
PRG4Q92954 GCSHP2-201ENST00000560971 527 ntBASIC31.34■■■□□ 2.61
PRG4Q92954 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
PRG4Q92954 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PRG4Q92954 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC31.34■■■□□ 2.61
PRG4Q92954 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRG4Q92954 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRG4Q92954 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PRG4Q92954 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC31.34■■■□□ 2.61
PRG4Q92954 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRG4Q92954 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PRG4Q92954 AP000523.1-201ENST00000398242 1049 ntBASIC31.33■■■□□ 2.61
PRG4Q92954 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC31.33■■■□□ 2.61
PRG4Q92954 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC31.33■■■□□ 2.61
PRG4Q92954 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PRG4Q92954 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC31.33■■■□□ 2.61
PRG4Q92954 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRG4Q92954 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
PRG4Q92954 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
PRG4Q92954 NEK4P2-201ENST00000580004 1012 ntBASIC31.32■■■□□ 2.61
PRG4Q92954 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC31.32■■■□□ 2.61
PRG4Q92954 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
PRG4Q92954 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PRG4Q92954 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC31.32■■■□□ 2.6
PRG4Q92954 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.32■■■□□ 2.6
PRG4Q92954 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
PRG4Q92954 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PRG4Q92954 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC31.32■■■□□ 2.6
PRG4Q92954 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC31.32■■■□□ 2.6
PRG4Q92954 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PRG4Q92954 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
PRG4Q92954 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRG4Q92954 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC31.31■■■□□ 2.6
PRG4Q92954 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
PRG4Q92954 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRG4Q92954 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRG4Q92954 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PRG4Q92954 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC31.31■■■□□ 2.6
PRG4Q92954 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRG4Q92954 FAAHP1-202ENST00000446499 1238 ntBASIC31.31■■■□□ 2.6
PRG4Q92954 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
PRG4Q92954 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC31.31■■■□□ 2.6
PRG4Q92954 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRG4Q92954 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PRG4Q92954 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC31.31■■■□□ 2.6
PRG4Q92954 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC31.3■■■□□ 2.6
PRG4Q92954 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 PHGDH-210ENST00000641115 1638 ntBASIC31.3■■■□□ 2.6
PRG4Q92954 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 KRT16P6-202ENST00000425692 1426 ntBASIC31.3■■■□□ 2.6
PRG4Q92954 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
PRG4Q92954 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC31.3■■■□□ 2.6
PRG4Q92954 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC31.3■■■□□ 2.6
PRG4Q92954 CKBP1-201ENST00000565489 1086 ntBASIC31.3■■■□□ 2.6
PRG4Q92954 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PRG4Q92954 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
PRG4Q92954 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC31.29■■■□□ 2.6
PRG4Q92954 AC233723.2-201ENST00000623798 2106 ntBASIC31.29■■■□□ 2.6
PRG4Q92954 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PRG4Q92954 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PRG4Q92954 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PRG4Q92954 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PRG4Q92954 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.29■■■□□ 2.6
PRG4Q92954 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.29■■■□□ 2.6
PRG4Q92954 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms