Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC1Q92922 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.2■■□□□ 1.62
SMARCC1Q92922 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.2■■□□□ 1.62
SMARCC1Q92922 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC25.2■■□□□ 1.62
SMARCC1Q92922 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC1Q92922 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.2■■□□□ 1.62
SMARCC1Q92922 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC1Q92922 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC1Q92922 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC1Q92922 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC1Q92922 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC1Q92922 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.19■■□□□ 1.62
SMARCC1Q92922 AC140113.3-201ENST00000605663 199 ntBASIC25.19■■□□□ 1.62
SMARCC1Q92922 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.19■■□□□ 1.62
SMARCC1Q92922 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
SMARCC1Q92922 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC25.19■■□□□ 1.62
SMARCC1Q92922 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCC1Q92922 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.19■■□□□ 1.62
SMARCC1Q92922 KRT8P8-201ENST00000434750 1448 ntBASIC25.19■■□□□ 1.62
SMARCC1Q92922 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC1Q92922 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 AC092720.2-201ENST00000602388 1665 ntBASIC25.18■■□□□ 1.62
SMARCC1Q92922 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC1Q92922 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC1Q92922 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 TPM4P1-201ENST00000436100 807 ntBASIC25.18■■□□□ 1.62
SMARCC1Q92922 AL671277.2-201ENST00000458060 996 ntBASIC25.18■■□□□ 1.62
SMARCC1Q92922 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.18■■□□□ 1.62
SMARCC1Q92922 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC1Q92922 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC1Q92922 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCC1Q92922 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCC1Q92922 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.17■■□□□ 1.62
SMARCC1Q92922 AC006128.1-201ENST00000624704 1661 ntBASIC25.17■■□□□ 1.62
SMARCC1Q92922 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 AL117328.2-201ENST00000624617 1940 ntBASIC25.16■■□□□ 1.62
SMARCC1Q92922 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 AC008622.2-201ENST00000617006 1229 ntBASIC25.16■■□□□ 1.62
SMARCC1Q92922 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMARCC1Q92922 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SMARCC1Q92922 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 AC007225.1-201ENST00000566331 1836 ntBASIC25.15■■□□□ 1.62
SMARCC1Q92922 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 DUSP5P1-201ENST00000441325 1139 ntBASIC25.15■■□□□ 1.62
SMARCC1Q92922 AL359075.1-203ENST00000462729 1002 ntBASIC25.15■■□□□ 1.62
SMARCC1Q92922 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 AL441883.1-201ENST00000566170 1045 ntBASIC25.15■■□□□ 1.62
SMARCC1Q92922 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.15■■□□□ 1.62
SMARCC1Q92922 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCC1Q92922 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms