Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.47■□□□□ 0.07
NPIPB3Q92617 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPIPB3Q92617 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 AL589743.5-201ENST00000616611 1050 ntBASIC15.46■□□□□ 0.07
NPIPB3Q92617 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPB3Q92617 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPB3Q92617 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
NPIPB3Q92617 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.46■□□□□ 0.06
NPIPB3Q92617 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPB3Q92617 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPB3Q92617 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPB3Q92617 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 C2orf69P4-201ENST00000565394 541 ntBASIC15.45■□□□□ 0.06
NPIPB3Q92617 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 AC090340.1-201ENST00000620778 4980 ntBASIC15.45■□□□□ 0.06
NPIPB3Q92617 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPB3Q92617 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPB3Q92617 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPB3Q92617 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPB3Q92617 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms