Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RGP1Q92546 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.12■□□□□ 0.33
RGP1Q92546 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.12■□□□□ 0.33
RGP1Q92546 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.12■□□□□ 0.33
RGP1Q92546 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.12■□□□□ 0.33
RGP1Q92546 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RGP1Q92546 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.12■□□□□ 0.33
RGP1Q92546 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.12■□□□□ 0.33
RGP1Q92546 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RGP1Q92546 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.12■□□□□ 0.33
RGP1Q92546 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RGP1Q92546 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.12■□□□□ 0.33
RGP1Q92546 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.11■□□□□ 0.33
RGP1Q92546 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RGP1Q92546 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 AC023632.3-201ENST00000521633 145 ntBASIC17.11■□□□□ 0.33
RGP1Q92546 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.11■□□□□ 0.33
RGP1Q92546 DUX4L16-201ENST00000555130 1264 ntBASIC17.11■□□□□ 0.33
RGP1Q92546 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.11■□□□□ 0.33
RGP1Q92546 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RGP1Q92546 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RGP1Q92546 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RGP1Q92546 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RGP1Q92546 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
RGP1Q92546 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RGP1Q92546 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RGP1Q92546 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
RGP1Q92546 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RGP1Q92546 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RGP1Q92546 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.1■□□□□ 0.33
RGP1Q92546 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 CYP2T1P-201ENST00000432607 1285 ntBASIC17.1■□□□□ 0.33
RGP1Q92546 KRT18P11-201ENST00000435214 1283 ntBASIC17.1■□□□□ 0.33
RGP1Q92546 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.1■□□□□ 0.33
RGP1Q92546 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RGP1Q92546 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.1■□□□□ 0.33
RGP1Q92546 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.1■□□□□ 0.33
RGP1Q92546 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.1■□□□□ 0.33
RGP1Q92546 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.1■□□□□ 0.33
RGP1Q92546 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.1■□□□□ 0.33
RGP1Q92546 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.1■□□□□ 0.33
RGP1Q92546 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.1■□□□□ 0.33
RGP1Q92546 TEX21P-204ENST00000641479 1693 ntBASIC17.1■□□□□ 0.33
RGP1Q92546 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RGP1Q92546 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RGP1Q92546 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.09■□□□□ 0.33
RGP1Q92546 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.09■□□□□ 0.33
RGP1Q92546 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.09■□□□□ 0.33
RGP1Q92546 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
RGP1Q92546 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.09■□□□□ 0.33
RGP1Q92546 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
RGP1Q92546 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RGP1Q92546 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms