Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
CHMP7Q8WUX9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 AC009078.2-202ENST00000463353 338 ntBASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 NEK4P2-201ENST00000580004 1012 ntBASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP7Q8WUX9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC32.01■■■□□ 2.72
CHMP7Q8WUX9 KRT16P6-202ENST00000425692 1426 ntBASIC32.01■■■□□ 2.72
CHMP7Q8WUX9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.72
CHMP7Q8WUX9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CHMP7Q8WUX9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC32.01■■■□□ 2.72
CHMP7Q8WUX9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CHMP7Q8WUX9 AL022342.1-201ENST00000400363 863 ntBASIC32.01■■■□□ 2.71
CHMP7Q8WUX9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC32.01■■■□□ 2.71
CHMP7Q8WUX9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC32.01■■■□□ 2.71
CHMP7Q8WUX9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CHMP7Q8WUX9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC32.01■■■□□ 2.71
CHMP7Q8WUX9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC32■■■□□ 2.71
CHMP7Q8WUX9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHMP7Q8WUX9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC32■■■□□ 2.71
CHMP7Q8WUX9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC32■■■□□ 2.71
CHMP7Q8WUX9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CHMP7Q8WUX9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 MIR3180-1-201ENST00000580374 94 ntBASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 MIR3180-3-201ENST00000584616 94 ntBASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
CHMP7Q8WUX9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 AC005229.4-201ENST00000610085 2198 ntBASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC31.97■■■□□ 2.71
CHMP7Q8WUX9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 AL645929.1-201ENST00000420084 975 ntBASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 GXYLT1P4-201ENST00000613576 1192 ntBASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CHMP7Q8WUX9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
CHMP7Q8WUX9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CHMP7Q8WUX9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CHMP7Q8WUX9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
CHMP7Q8WUX9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP7Q8WUX9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.94■■■□□ 2.7
CHMP7Q8WUX9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP7Q8WUX9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP7Q8WUX9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP7Q8WUX9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP7Q8WUX9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms