Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
RAB3IL1Q8TBN0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 RARRES2P6-201ENST00000567333 442 ntBASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3IL1Q8TBN0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 LINC02228-203ENST00000641970 1355 ntBASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3IL1Q8TBN0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3IL1Q8TBN0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3IL1Q8TBN0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3IL1Q8TBN0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.52■□□□□ 0.71
RAB3IL1Q8TBN0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RAB3IL1Q8TBN0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3IL1Q8TBN0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3IL1Q8TBN0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms