Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 MFAP1P1-201ENST00000442257 1255 ntBASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 AC011558.1-201ENST00000623459 338 ntBASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.53■□□□□ 0.56
SNIP1Q8TAD8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 YBX1P10-201ENST00000444752 975 ntBASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 AL512604.3-201ENST00000569583 964 ntBASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 AC011298.2-201ENST00000617989 482 ntBASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 AC116407.4-201ENST00000623319 1061 ntBASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNIP1Q8TAD8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNIP1Q8TAD8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.52■□□□□ 0.55
SNIP1Q8TAD8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SNIP1Q8TAD8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SNIP1Q8TAD8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNIP1Q8TAD8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 RCC2P6-201ENST00000526625 1557 ntBASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 AC007663.1-201ENST00000438948 1240 ntBASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 AL671277.2-201ENST00000458060 996 ntBASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 KRT18P16-201ENST00000510337 1294 ntBASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 AC069148.1-201ENST00000608741 768 ntBASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNIP1Q8TAD8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms