Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 AC092183.1-201ENST00000469884 875 ntBASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 AC106795.1-205ENST00000512851 1056 ntBASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC168Q8NDH2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 HLA-G-202ENST00000376815 851 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 HLA-G-203ENST00000376818 1127 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 SPDYE15P-201ENST00000424157 909 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 ZNF444P1-201ENST00000559497 298 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 NEK4P2-201ENST00000580004 1012 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 AC018553.1-201ENST00000616682 1458 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 HBZP1-201ENST00000354915 429 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 AL353719.1-201ENST00000566847 864 ntBASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC168Q8NDH2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 SPDYE13P-201ENST00000445314 798 ntBASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 CA15P1-201ENST00000481698 905 ntBASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 AC120114.3-201ENST00000611923 658 ntBASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC168Q8NDH2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms