Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71LQ8N9Z2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71LQ8N9Z2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC71LQ8N9Z2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC71LQ8N9Z2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71LQ8N9Z2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC71LQ8N9Z2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC71LQ8N9Z2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 AL031963.3-201ENST00000606441 850 ntBASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC71LQ8N9Z2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 KRT8P20-201ENST00000423953 1409 ntBASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 AC019069.1-201ENST00000610008 1333 ntBASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 AL138781.2-201ENST00000617896 1843 ntBASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC71LQ8N9Z2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 TERF1P2-201ENST00000583350 1212 ntBASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 AL031432.3-201ENST00000607698 485 ntBASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71LQ8N9Z2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms