Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 KRT18P16-201ENST00000510337 1294 ntBASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 AL353708.3-201ENST00000610272 989 ntBASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN4BQ8IWT1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 NIFKP9-201ENST00000419265 221 ntBASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 AP003071.4-201ENST00000562276 1284 ntBASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 C1QL1P1-201ENST00000568105 661 ntBASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN4BQ8IWT1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCN4BQ8IWT1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 AL355075.4-201ENST00000554988 638 ntBASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 AP001271.2-201ENST00000624018 1556 ntBASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SCN4BQ8IWT1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 KSR1P1-201ENST00000446298 240 ntBASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 AC073912.3-201ENST00000624414 853 ntBASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SCN4BQ8IWT1 AC099778.1-201ENST00000568593 1911 ntBASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 TMEM179-206ENST00000616017 1645 ntBASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms