Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC83Q8IWF9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 AL020996.1-203ENST00000536896 2307 ntBASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC83Q8IWF9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 AC124283.5-201ENST00000624661 1809 ntBASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 AC005829.2-201ENST00000571422 1056 ntBASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 AC006557.6-201ENST00000623071 864 ntBASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CCDC83Q8IWF9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 AC091874.3-201ENST00000512672 1195 ntBASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC83Q8IWF9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.27
CCDC83Q8IWF9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 AC092118.2-201ENST00000613495 667 ntBASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 TFP1-202ENST00000475455 1573 ntBASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC83Q8IWF9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC83Q8IWF9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC83Q8IWF9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC83Q8IWF9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC83Q8IWF9 AL390719.1-204ENST00000412397 1219 ntBASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms