Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD3Q7Z3D4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 AC239809.2-201ENST00000415381 517 ntBASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 C1QBPP2-201ENST00000528754 825 ntBASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 AP006587.1-201ENST00000534129 1502 ntBASIC19.71■□□□□ 0.75
LYSMD3Q7Z3D4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 KRASP1-201ENST00000407852 552 ntBASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 AC098590.1-201ENST00000468126 897 ntBASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LYSMD3Q7Z3D4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 AC125437.2-201ENST00000625180 2167 ntBASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 GCSHP5-201ENST00000443090 522 ntBASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 AC124016.1-201ENST00000609552 612 ntBASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms