Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AL031133.1-201ENST00000406807 723 ntBASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 NME1-207ENST00000480143 964 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC141Q6ZP82 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 CD70-202ENST00000423145 881 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
CCDC141Q6ZP82 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 CD37-204ENST00000535669 1674 ntTSL 2 BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 RNF152P1-201ENST00000397754 604 ntBASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 AC141257.4-201ENST00000634557 245 ntBASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 AC136944.6-201ENST00000634818 245 ntBASIC29.4■■■□□ 2.3
CCDC141Q6ZP82 FEM1AP1-201ENST00000431297 1995 ntBASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 ANKRD20A18P-201ENST00000359341 492 ntBASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 CA15P1-201ENST00000481698 905 ntBASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 AL160286.2-201ENST00000567150 934 ntBASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.39■■■□□ 2.3
CCDC141Q6ZP82 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 UPK3BP1-201ENST00000428678 509 ntBASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 COX11P1-201ENST00000489116 835 ntBASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 USF2-205ENST00000594064 1179 ntTSL 2 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 LINC00565-201ENST00000562710 2331 ntBASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 KRT8P41-201ENST00000533985 1514 ntBASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC141Q6ZP82 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCDC141Q6ZP82 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 TSPY17P-201ENST00000450329 467 ntBASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 AC091076.1-201ENST00000610741 619 ntBASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC141Q6ZP82 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms