Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL54Q6P161 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MRPL54Q6P161 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL54Q6P161 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.82□□□□□ -0.04
MRPL54Q6P161 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MRPL54Q6P161 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL54Q6P161 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL54Q6P161 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.82□□□□□ -0.04
MRPL54Q6P161 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MRPL54Q6P161 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 AC106820.2-201ENST00000563775 3264 ntBASIC14.81□□□□□ -0.04
MRPL54Q6P161 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 AC012313.1-201ENST00000593393 3059 ntBASIC14.81□□□□□ -0.04
MRPL54Q6P161 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
MRPL54Q6P161 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.81□□□□□ -0.04
MRPL54Q6P161 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 SLC47A1P1-202ENST00000449666 945 ntBASIC14.8□□□□□ -0.04
MRPL54Q6P161 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 MIR6724-1-201ENST00000616420 92 ntBASIC14.8□□□□□ -0.04
MRPL54Q6P161 MIR6724-2-201ENST00000616483 92 ntBASIC14.8□□□□□ -0.04
MRPL54Q6P161 MIR6724-4-201ENST00000617390 92 ntBASIC14.8□□□□□ -0.04
MRPL54Q6P161 MIR6724-3-201ENST00000622482 92 ntBASIC14.8□□□□□ -0.04
MRPL54Q6P161 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.8□□□□□ -0.04
MRPL54Q6P161 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MRPL54Q6P161 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MRPL54Q6P161 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
MRPL54Q6P161 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MRPL54Q6P161 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MRPL54Q6P161 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms