Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC153Q494R4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC153Q494R4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC153Q494R4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 C2orf69P4-201ENST00000565394 541 ntBASIC19.39■□□□□ 0.69
CCDC153Q494R4 AL589743.5-201ENST00000616611 1050 ntBASIC19.39■□□□□ 0.69
CCDC153Q494R4 AC008694.1-202ENST00000636953 945 ntBASIC19.39■□□□□ 0.69
CCDC153Q494R4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC153Q494R4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC153Q494R4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC153Q494R4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC153Q494R4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.37■□□□□ 0.69
CCDC153Q494R4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 AL138781.2-201ENST00000617896 1843 ntBASIC19.37■□□□□ 0.69
CCDC153Q494R4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC153Q494R4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC153Q494R4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC153Q494R4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC153Q494R4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC153Q494R4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC153Q494R4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC153Q494R4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC153Q494R4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC153Q494R4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms