Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 AC012618.2-201ENST00000428058 849 ntBASIC20.81■□□□□ 0.92
CACNA2D1P54289 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 SNORA78-201ENST00000459373 127 ntBASIC20.81■□□□□ 0.92
CACNA2D1P54289 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 RARRES2P10-201ENST00000564312 460 ntBASIC20.81■□□□□ 0.92
CACNA2D1P54289 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.81■□□□□ 0.92
CACNA2D1P54289 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CACNA2D1P54289 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 HTR7P1-201ENST00000538670 1336 ntBASIC20.8■□□□□ 0.92
CACNA2D1P54289 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CACNA2D1P54289 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNA2D1P54289 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 MIR718-201ENST00000390190 70 ntBASIC20.79■□□□□ 0.92
CACNA2D1P54289 TSPY7P-201ENST00000431358 1114 ntBASIC20.79■□□□□ 0.92
CACNA2D1P54289 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.79■□□□□ 0.92
CACNA2D1P54289 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 AC113410.3-201ENST00000623366 203 ntBASIC20.79■□□□□ 0.92
CACNA2D1P54289 AL049637.2-201ENST00000641778 930 ntBASIC20.79■□□□□ 0.92
CACNA2D1P54289 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNA2D1P54289 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA2D1P54289 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA2D1P54289 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA2D1P54289 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA2D1P54289 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 MIR4497-201ENST00000583208 89 ntBASIC20.78■□□□□ 0.92
CACNA2D1P54289 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNA2D1P54289 TCF3P1-201ENST00000423021 1937 ntBASIC20.78■□□□□ 0.92
CACNA2D1P54289 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CACNA2D1P54289 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.77■□□□□ 0.92
CACNA2D1P54289 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CACNA2D1P54289 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNA2D1P54289 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms