Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LIMK2P53671 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.77■□□□□ 0.76
LIMK2P53671 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.77■□□□□ 0.76
LIMK2P53671 HLA-G-202ENST00000376815 851 ntBASIC19.77■□□□□ 0.76
LIMK2P53671 HLA-G-203ENST00000376818 1127 ntBASIC19.77■□□□□ 0.76
LIMK2P53671 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.77■□□□□ 0.76
LIMK2P53671 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.77■□□□□ 0.76
LIMK2P53671 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.77■□□□□ 0.76
LIMK2P53671 PNMA6B-201ENST00000538162 1200 ntBASIC19.77■□□□□ 0.76
LIMK2P53671 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LIMK2P53671 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 AC098818.2-201ENST00000564925 2320 ntBASIC19.77■□□□□ 0.76
LIMK2P53671 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK2P53671 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.77■□□□□ 0.75
LIMK2P53671 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIMK2P53671 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIMK2P53671 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIMK2P53671 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LIMK2P53671 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.76■□□□□ 0.75
LIMK2P53671 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.76■□□□□ 0.75
LIMK2P53671 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK2P53671 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.76■□□□□ 0.75
LIMK2P53671 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK2P53671 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
LIMK2P53671 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 AC092368.3-202ENST00000574180 1591 ntBASIC19.75■□□□□ 0.75
LIMK2P53671 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.75■□□□□ 0.75
LIMK2P53671 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 UNC93B4-201ENST00000505679 747 ntBASIC19.75■□□□□ 0.75
LIMK2P53671 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.75■□□□□ 0.75
LIMK2P53671 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.75■□□□□ 0.75
LIMK2P53671 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LIMK2P53671 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIMK2P53671 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LIMK2P53671 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.74■□□□□ 0.75
LIMK2P53671 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.74■□□□□ 0.75
LIMK2P53671 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 AC023632.3-201ENST00000521633 145 ntBASIC19.74■□□□□ 0.75
LIMK2P53671 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LIMK2P53671 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIMK2P53671 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.74■□□□□ 0.75
LIMK2P53671 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LIMK2P53671 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
LIMK2P53671 Z82202.1-201ENST00000623446 1880 ntBASIC19.73■□□□□ 0.75
LIMK2P53671 PHGDH-210ENST00000641115 1638 ntBASIC19.73■□□□□ 0.75
LIMK2P53671 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LIMK2P53671 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.73■□□□□ 0.75
LIMK2P53671 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LIMK2P53671 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms