Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GTF2A1P52655 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
GTF2A1P52655 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
GTF2A1P52655 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.25■□□□□ 0.67
GTF2A1P52655 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 DUX4L4-201ENST00000566884 1269 ntBASIC19.25■□□□□ 0.67
GTF2A1P52655 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF2A1P52655 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.25■□□□□ 0.67
GTF2A1P52655 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GTF2A1P52655 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.25■□□□□ 0.67
GTF2A1P52655 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GTF2A1P52655 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.25■□□□□ 0.67
GTF2A1P52655 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.25■□□□□ 0.67
GTF2A1P52655 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.25■□□□□ 0.67
GTF2A1P52655 AC005703.6-201ENST00000623265 1329 ntBASIC19.25■□□□□ 0.67
GTF2A1P52655 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
GTF2A1P52655 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.24■□□□□ 0.67
GTF2A1P52655 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GTF2A1P52655 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 CA15P2-201ENST00000611168 834 ntBASIC19.24■□□□□ 0.67
GTF2A1P52655 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.24■□□□□ 0.67
GTF2A1P52655 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GTF2A1P52655 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF2A1P52655 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF2A1P52655 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
GTF2A1P52655 TSPY13P-201ENST00000338964 914 ntBASIC19.23■□□□□ 0.67
GTF2A1P52655 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.23■□□□□ 0.67
GTF2A1P52655 AC103834.1-201ENST00000520383 144 ntBASIC19.23■□□□□ 0.67
GTF2A1P52655 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.23■□□□□ 0.67
GTF2A1P52655 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.23■□□□□ 0.67
GTF2A1P52655 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2A1P52655 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GTF2A1P52655 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GTF2A1P52655 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
GTF2A1P52655 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2A1P52655 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2A1P52655 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2A1P52655 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2A1P52655 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2A1P52655 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.21■□□□□ 0.67
GTF2A1P52655 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.21■□□□□ 0.67
GTF2A1P52655 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2A1P52655 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GTF2A1P52655 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GTF2A1P52655 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2A1P52655 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms