Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CDR1P51861 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDR1P51861 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDR1P51861 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.41■■□□□ 1.02
CDR1P51861 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDR1P51861 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDR1P51861 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDR1P51861 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDR1P51861 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.41■■□□□ 1.02
CDR1P51861 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDR1P51861 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.4■■□□□ 1.02
CDR1P51861 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
CDR1P51861 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CDR1P51861 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDR1P51861 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.4■■□□□ 1.02
CDR1P51861 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 KRT17P3-201ENST00000420566 1262 ntBASIC21.4■■□□□ 1.02
CDR1P51861 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
CDR1P51861 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.4■■□□□ 1.02
CDR1P51861 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.4■■□□□ 1.02
CDR1P51861 AL359736.2-201ENST00000621992 437 ntBASIC21.4■■□□□ 1.02
CDR1P51861 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.4■■□□□ 1.02
CDR1P51861 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.4■■□□□ 1.02
CDR1P51861 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDR1P51861 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.4■■□□□ 1.02
CDR1P51861 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.39■■□□□ 1.02
CDR1P51861 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDR1P51861 AL020996.1-203ENST00000536896 2307 ntBASIC21.39■■□□□ 1.02
CDR1P51861 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CDR1P51861 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CDR1P51861 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDR1P51861 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 SMG8-203ENST00000578922 2178 ntBASIC21.39■■□□□ 1.01
CDR1P51861 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.39■■□□□ 1.01
CDR1P51861 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CDR1P51861 RPPH1-201ENST00000516869 333 ntBASIC21.39■■□□□ 1.01
CDR1P51861 AC005829.2-201ENST00000571422 1056 ntBASIC21.39■■□□□ 1.01
CDR1P51861 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
CDR1P51861 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
CDR1P51861 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.39■■□□□ 1.01
CDR1P51861 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CDR1P51861 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDR1P51861 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDR1P51861 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.38■■□□□ 1.01
CDR1P51861 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDR1P51861 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.38■■□□□ 1.01
CDR1P51861 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 POM121L13P-201ENST00000422362 380 ntBASIC21.38■■□□□ 1.01
CDR1P51861 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.38■■□□□ 1.01
CDR1P51861 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.38■■□□□ 1.01
CDR1P51861 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.38■■□□□ 1.01
CDR1P51861 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.38■■□□□ 1.01
CDR1P51861 FAM197Y4-202ENST00000622692 608 ntBASIC21.38■■□□□ 1.01
CDR1P51861 AL023875.1-201ENST00000640777 796 ntBASIC21.38■■□□□ 1.01
CDR1P51861 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDR1P51861 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.38■■□□□ 1.01
CDR1P51861 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.38■■□□□ 1.01
CDR1P51861 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.38■■□□□ 1.01
CDR1P51861 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDR1P51861 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.37■■□□□ 1.01
CDR1P51861 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDR1P51861 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.37■■□□□ 1.01
CDR1P51861 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CDR1P51861 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDR1P51861 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.37■■□□□ 1.01
CDR1P51861 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CDR1P51861 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms