Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB28P51157 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RAB28P51157 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.99■□□□□ 0.63
RAB28P51157 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 AC073130.3-201ENST00000624389 2278 ntBASIC18.99■□□□□ 0.63
RAB28P51157 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB28P51157 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAB28P51157 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB28P51157 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB28P51157 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.98■□□□□ 0.63
RAB28P51157 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.98■□□□□ 0.63
RAB28P51157 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 AC066615.1-201ENST00000640911 628 ntBASIC18.98■□□□□ 0.63
RAB28P51157 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RAB28P51157 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.98■□□□□ 0.63
RAB28P51157 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB28P51157 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RAB28P51157 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB28P51157 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RAB28P51157 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB28P51157 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAB28P51157 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAB28P51157 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAB28P51157 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB28P51157 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAB28P51157 AP006294.2-201ENST00000641667 209 ntBASIC18.97■□□□□ 0.63
RAB28P51157 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
RAB28P51157 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RAB28P51157 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB28P51157 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RAB28P51157 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RAB28P51157 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 RARRES2P10-201ENST00000564312 460 ntBASIC18.96■□□□□ 0.63
RAB28P51157 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB28P51157 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB28P51157 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB28P51157 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB28P51157 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 AL135905.2-201ENST00000584934 1404 ntBASIC18.95■□□□□ 0.62
RAB28P51157 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB28P51157 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.95■□□□□ 0.62
RAB28P51157 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.95■□□□□ 0.62
RAB28P51157 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB28P51157 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB28P51157 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB28P51157 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms