Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PCP4P48539 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PCP4P48539 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCP4P48539 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.62□□□□□ -0.23
PCP4P48539 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PCP4P48539 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PCP4P48539 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.62□□□□□ -0.23
PCP4P48539 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
PCP4P48539 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
PCP4P48539 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
PCP4P48539 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PCP4P48539 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.61□□□□□ -0.23
PCP4P48539 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.61□□□□□ -0.23
PCP4P48539 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.61□□□□□ -0.23
PCP4P48539 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.61□□□□□ -0.23
PCP4P48539 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PCP4P48539 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCP4P48539 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.61□□□□□ -0.23
PCP4P48539 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.61□□□□□ -0.23
PCP4P48539 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.61□□□□□ -0.23
PCP4P48539 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PCP4P48539 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
PCP4P48539 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCP4P48539 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCP4P48539 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.6□□□□□ -0.23
PCP4P48539 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCP4P48539 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.6□□□□□ -0.23
PCP4P48539 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCP4P48539 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PCP4P48539 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
PCP4P48539 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PCP4P48539 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.6□□□□□ -0.23
PCP4P48539 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PCP4P48539 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.6□□□□□ -0.23
PCP4P48539 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 AC011676.5-201ENST00000624864 2660 ntBASIC13.6□□□□□ -0.23
PCP4P48539 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC13.6□□□□□ -0.23
PCP4P48539 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 AC099063.4-201ENST00000641099 1602 ntBASIC13.6□□□□□ -0.23
PCP4P48539 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.6□□□□□ -0.23
PCP4P48539 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCP4P48539 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.59□□□□□ -0.23
PCP4P48539 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PCP4P48539 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms