Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GABRA4P48169 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRA4P48169 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
GABRA4P48169 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.65■□□□□ 0.58
GABRA4P48169 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GABRA4P48169 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.65■□□□□ 0.58
GABRA4P48169 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
GABRA4P48169 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRA4P48169 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GABRA4P48169 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 KRT16P1-201ENST00000399124 1418 ntBASIC18.65■□□□□ 0.58
GABRA4P48169 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GABRA4P48169 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA4P48169 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
GABRA4P48169 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GABRA4P48169 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GABRA4P48169 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GABRA4P48169 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
GABRA4P48169 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
GABRA4P48169 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.64■□□□□ 0.57
GABRA4P48169 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GABRA4P48169 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.64■□□□□ 0.57
GABRA4P48169 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.64■□□□□ 0.57
GABRA4P48169 AL355355.2-201ENST00000442321 338 ntBASIC18.64■□□□□ 0.57
GABRA4P48169 AC116562.2-201ENST00000507042 360 ntBASIC18.64■□□□□ 0.57
GABRA4P48169 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.64■□□□□ 0.57
GABRA4P48169 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.64■□□□□ 0.57
GABRA4P48169 BX088651.1-201ENST00000540551 451 ntBASIC18.64■□□□□ 0.57
GABRA4P48169 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.64■□□□□ 0.57
GABRA4P48169 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.64■□□□□ 0.57
GABRA4P48169 HLA-A-209ENST00000638375 975 ntBASIC18.64■□□□□ 0.57
GABRA4P48169 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.64■□□□□ 0.57
GABRA4P48169 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA4P48169 LINC01521-201ENST00000504184 1943 ntBASIC18.63■□□□□ 0.57
GABRA4P48169 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.63■□□□□ 0.57
GABRA4P48169 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.63■□□□□ 0.57
GABRA4P48169 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
GABRA4P48169 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.63■□□□□ 0.57
GABRA4P48169 REXO1L10P-201ENST00000615707 1290 ntBASIC18.63■□□□□ 0.57
GABRA4P48169 REXO1L12P-201ENST00000622156 912 ntBASIC18.63■□□□□ 0.57
GABRA4P48169 AC073912.3-201ENST00000624414 853 ntBASIC18.63■□□□□ 0.57
GABRA4P48169 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 KRT8P8-201ENST00000434750 1448 ntBASIC18.63■□□□□ 0.57
GABRA4P48169 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.63■□□□□ 0.57
GABRA4P48169 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABRA4P48169 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
GABRA4P48169 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GABRA4P48169 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
GABRA4P48169 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.62■□□□□ 0.57
GABRA4P48169 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.62■□□□□ 0.57
GABRA4P48169 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 MESTP1-201ENST00000404287 994 ntBASIC18.62■□□□□ 0.57
GABRA4P48169 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.62■□□□□ 0.57
GABRA4P48169 AC004980.1-204ENST00000429707 299 ntBASIC18.62■□□□□ 0.57
GABRA4P48169 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.62■□□□□ 0.57
GABRA4P48169 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GABRA4P48169 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
GABRA4P48169 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABRA4P48169 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
GABRA4P48169 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABRA4P48169 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
GABRA4P48169 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms