Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A12P48065 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A12P48065 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC6A12P48065 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A12P48065 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC6A12P48065 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC6A12P48065 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC6A12P48065 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC6A12P48065 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SLC6A12P48065 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A12P48065 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SLC6A12P48065 RNA5SP413-201ENST00000516373 109 ntBASIC18.95■□□□□ 0.62
SLC6A12P48065 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC6A12P48065 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC6A12P48065 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SLC6A12P48065 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A12P48065 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SLC6A12P48065 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A12P48065 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A12P48065 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 KRT18P6-201ENST00000555540 1265 ntBASIC18.94■□□□□ 0.62
SLC6A12P48065 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A12P48065 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC6A12P48065 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLC6A12P48065 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A12P48065 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SLC6A12P48065 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SLC6A12P48065 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A12P48065 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A12P48065 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A12P48065 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A12P48065 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A12P48065 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A12P48065 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 AP003097.1-201ENST00000530657 1135 ntBASIC18.93■□□□□ 0.62
SLC6A12P48065 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SLC6A12P48065 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC6A12P48065 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC6A12P48065 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A12P48065 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A12P48065 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SLC6A12P48065 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A12P48065 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms