Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.84■□□□□ 0.77
HADHAP40939 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
HADHAP40939 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.84■□□□□ 0.77
HADHAP40939 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HADHAP40939 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HADHAP40939 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.84■□□□□ 0.77
HADHAP40939 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HADHAP40939 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
HADHAP40939 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.83■□□□□ 0.77
HADHAP40939 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.83■□□□□ 0.77
HADHAP40939 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HADHAP40939 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.83■□□□□ 0.77
HADHAP40939 AC018445.3-201ENST00000624177 1945 ntBASIC19.83■□□□□ 0.77
HADHAP40939 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.83■□□□□ 0.77
HADHAP40939 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.83■□□□□ 0.77
HADHAP40939 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HADHAP40939 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.83■□□□□ 0.77
HADHAP40939 AC006557.6-201ENST00000623071 864 ntBASIC19.83■□□□□ 0.77
HADHAP40939 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HADHAP40939 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HADHAP40939 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
HADHAP40939 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HADHAP40939 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HADHAP40939 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.83■□□□□ 0.76
HADHAP40939 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HADHAP40939 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.83■□□□□ 0.76
HADHAP40939 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.83■□□□□ 0.76
HADHAP40939 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HADHAP40939 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.82■□□□□ 0.76
HADHAP40939 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HADHAP40939 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.82■□□□□ 0.76
HADHAP40939 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.82■□□□□ 0.76
HADHAP40939 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.82■□□□□ 0.76
HADHAP40939 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.82■□□□□ 0.76
HADHAP40939 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.82■□□□□ 0.76
HADHAP40939 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.82■□□□□ 0.76
HADHAP40939 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HADHAP40939 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.82■□□□□ 0.76
HADHAP40939 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
HADHAP40939 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HADHAP40939 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
HADHAP40939 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HADHAP40939 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.81■□□□□ 0.76
HADHAP40939 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HADHAP40939 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.81■□□□□ 0.76
HADHAP40939 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
HADHAP40939 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.81■□□□□ 0.76
HADHAP40939 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.81■□□□□ 0.76
HADHAP40939 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.81■□□□□ 0.76
HADHAP40939 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.81■□□□□ 0.76
HADHAP40939 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.81■□□□□ 0.76
HADHAP40939 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.81■□□□□ 0.76
HADHAP40939 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 AC005332.7-201ENST00000614046 2005 ntBASIC19.81■□□□□ 0.76
HADHAP40939 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.81■□□□□ 0.76
HADHAP40939 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.81■□□□□ 0.76
HADHAP40939 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HADHAP40939 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HADHAP40939 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HADHAP40939 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.8■□□□□ 0.76
HADHAP40939 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.8■□□□□ 0.76
HADHAP40939 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HADHAP40939 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HADHAP40939 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.8■□□□□ 0.76
HADHAP40939 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.8■□□□□ 0.76
HADHAP40939 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.8■□□□□ 0.76
HADHAP40939 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms