Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS4P35443 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
THBS4P35443 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.27■□□□□ 0.35
THBS4P35443 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
THBS4P35443 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THBS4P35443 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THBS4P35443 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THBS4P35443 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
THBS4P35443 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
THBS4P35443 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.27■□□□□ 0.35
THBS4P35443 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
THBS4P35443 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS4P35443 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS4P35443 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
THBS4P35443 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.26■□□□□ 0.35
THBS4P35443 AC233263.1-201ENST00000578059 224 ntBASIC17.26■□□□□ 0.35
THBS4P35443 AC120498.8-201ENST00000614275 531 ntBASIC17.26■□□□□ 0.35
THBS4P35443 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS4P35443 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS4P35443 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS4P35443 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
THBS4P35443 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS4P35443 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS4P35443 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS4P35443 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS4P35443 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS4P35443 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS4P35443 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS4P35443 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
THBS4P35443 AC098590.1-201ENST00000468126 897 ntBASIC17.25■□□□□ 0.35
THBS4P35443 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.25■□□□□ 0.35
THBS4P35443 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS4P35443 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
THBS4P35443 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
THBS4P35443 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
THBS4P35443 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS4P35443 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS4P35443 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS4P35443 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
THBS4P35443 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.24■□□□□ 0.35
THBS4P35443 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
THBS4P35443 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.24■□□□□ 0.35
THBS4P35443 AC142381.4-202ENST00000563973 229 ntBASIC17.24■□□□□ 0.35
THBS4P35443 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 AC069544.1-201ENST00000609399 999 ntBASIC17.24■□□□□ 0.35
THBS4P35443 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.24■□□□□ 0.35
THBS4P35443 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 PTBP1P-201ENST00000554374 1601 ntBASIC17.24■□□□□ 0.35
THBS4P35443 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.24■□□□□ 0.35
THBS4P35443 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS4P35443 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
THBS4P35443 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.23■□□□□ 0.35
THBS4P35443 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS4P35443 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS4P35443 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS4P35443 KRT8P17-201ENST00000453110 1448 ntBASIC17.23■□□□□ 0.35
THBS4P35443 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.23■□□□□ 0.35
THBS4P35443 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.23■□□□□ 0.35
THBS4P35443 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
THBS4P35443 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS4P35443 HLA-G-202ENST00000376815 851 ntBASIC17.23■□□□□ 0.35
THBS4P35443 HLA-G-203ENST00000376818 1127 ntBASIC17.23■□□□□ 0.35
THBS4P35443 AL158047.1-201ENST00000445918 881 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms