Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN7P35236 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPN7P35236 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN7P35236 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPN7P35236 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PTPN7P35236 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPN7P35236 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN7P35236 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN7P35236 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN7P35236 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
PTPN7P35236 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN7P35236 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN7P35236 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN7P35236 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTPN7P35236 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN7P35236 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.29■□□□□ 0.84
PTPN7P35236 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN7P35236 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN7P35236 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPN7P35236 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN7P35236 AC006970.2-201ENST00000450065 779 ntBASIC20.28■□□□□ 0.84
PTPN7P35236 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
PTPN7P35236 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN7P35236 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN7P35236 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN7P35236 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN7P35236 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN7P35236 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN7P35236 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN7P35236 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PTPN7P35236 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN7P35236 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN7P35236 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN7P35236 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 MYC-209ENST00000641252 345 ntBASIC20.27■□□□□ 0.84
PTPN7P35236 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPN7P35236 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN7P35236 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PTPN7P35236 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN7P35236 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTPN7P35236 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPN7P35236 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 NCF1B-203ENST00000435988 1254 ntBASIC20.26■□□□□ 0.83
PTPN7P35236 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.26■□□□□ 0.83
PTPN7P35236 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.26■□□□□ 0.83
PTPN7P35236 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTPN7P35236 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PTPN7P35236 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN7P35236 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN7P35236 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPN7P35236 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN7P35236 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN7P35236 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN7P35236 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN7P35236 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN7P35236 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN7P35236 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN7P35236 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN7P35236 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms