Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN6P29350 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN6P29350 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN6P29350 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN6P29350 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.62■□□□□ 0.57
PTPN6P29350 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 DUSP5P2-201ENST00000426873 1033 ntBASIC18.62■□□□□ 0.57
PTPN6P29350 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN6P29350 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN6P29350 C2orf69P4-201ENST00000565394 541 ntBASIC18.62■□□□□ 0.57
PTPN6P29350 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN6P29350 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN6P29350 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN6P29350 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.62■□□□□ 0.57
PTPN6P29350 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 MYC-209ENST00000641252 345 ntBASIC18.62■□□□□ 0.57
PTPN6P29350 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN6P29350 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN6P29350 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN6P29350 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PTPN6P29350 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN6P29350 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPN6P29350 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN6P29350 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN6P29350 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN6P29350 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTPN6P29350 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN6P29350 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN6P29350 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN6P29350 HLA-G-202ENST00000376815 851 ntBASIC18.61■□□□□ 0.57
PTPN6P29350 HLA-G-203ENST00000376818 1127 ntBASIC18.61■□□□□ 0.57
PTPN6P29350 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN6P29350 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTPN6P29350 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.61■□□□□ 0.57
PTPN6P29350 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN6P29350 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN6P29350 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN6P29350 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN6P29350 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN6P29350 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN6P29350 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN6P29350 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN6P29350 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTPN6P29350 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN6P29350 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPN6P29350 AC097658.1-201ENST00000475555 843 ntBASIC18.6■□□□□ 0.57
PTPN6P29350 KRT18P6-201ENST00000555540 1265 ntBASIC18.6■□□□□ 0.57
PTPN6P29350 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN6P29350 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN6P29350 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN6P29350 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN6P29350 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN6P29350 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN6P29350 AC083880.1-201ENST00000608266 535 ntBASIC18.59■□□□□ 0.57
PTPN6P29350 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN6P29350 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN6P29350 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms