Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN3P20807 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN3P20807 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CAPN3P20807 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CAPN3P20807 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN3P20807 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN3P20807 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.87■□□□□ 0.61
CAPN3P20807 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN3P20807 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CAPN3P20807 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN3P20807 LINC01465-201ENST00000408887 1940 ntBASIC18.86■□□□□ 0.61
CAPN3P20807 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 KRT8P20-201ENST00000423953 1409 ntBASIC18.86■□□□□ 0.61
CAPN3P20807 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 AC069152.1-201ENST00000438030 544 ntBASIC18.86■□□□□ 0.61
CAPN3P20807 AL162412.1-201ENST00000567129 965 ntBASIC18.86■□□□□ 0.61
CAPN3P20807 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.86■□□□□ 0.61
CAPN3P20807 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN3P20807 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN3P20807 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CAPN3P20807 NEFHP1-201ENST00000412845 2629 ntBASIC18.86■□□□□ 0.61
CAPN3P20807 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CAPN3P20807 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CAPN3P20807 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
CAPN3P20807 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN3P20807 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CAPN3P20807 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CAPN3P20807 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CAPN3P20807 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.85■□□□□ 0.61
CAPN3P20807 MIR4651-201ENST00000582622 73 ntBASIC18.85■□□□□ 0.61
CAPN3P20807 MFSD11-216ENST00000590393 1141 ntBASIC18.85■□□□□ 0.61
CAPN3P20807 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.85■□□□□ 0.61
CAPN3P20807 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN3P20807 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CAPN3P20807 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN3P20807 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CAPN3P20807 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CAPN3P20807 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.84■□□□□ 0.61
CAPN3P20807 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN3P20807 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN3P20807 AC007322.4-201ENST00000509611 723 ntBASIC18.84■□□□□ 0.61
CAPN3P20807 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN3P20807 DUX4L16-201ENST00000555130 1264 ntBASIC18.84■□□□□ 0.61
CAPN3P20807 AC005181.1-201ENST00000604782 1256 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms