Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.61■□□□□ 0.89
PDGFRAP16234 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.61■□□□□ 0.89
PDGFRAP16234 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.61■□□□□ 0.89
PDGFRAP16234 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.61■□□□□ 0.89
PDGFRAP16234 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.61■□□□□ 0.89
PDGFRAP16234 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.61■□□□□ 0.89
PDGFRAP16234 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFRAP16234 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PDGFRAP16234 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
PDGFRAP16234 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDGFRAP16234 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.61■□□□□ 0.89
PDGFRAP16234 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.6■□□□□ 0.89
PDGFRAP16234 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
PDGFRAP16234 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.6■□□□□ 0.89
PDGFRAP16234 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDGFRAP16234 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDGFRAP16234 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFRAP16234 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
PDGFRAP16234 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PDGFRAP16234 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFRAP16234 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PDGFRAP16234 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFRAP16234 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDGFRAP16234 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.59■□□□□ 0.89
PDGFRAP16234 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFRAP16234 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 POM121L13P-201ENST00000422362 380 ntBASIC20.59■□□□□ 0.89
PDGFRAP16234 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFRAP16234 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.59■□□□□ 0.89
PDGFRAP16234 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFRAP16234 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.59■□□□□ 0.89
PDGFRAP16234 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFRAP16234 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFRAP16234 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDGFRAP16234 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.58■□□□□ 0.89
PDGFRAP16234 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PDGFRAP16234 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDGFRAP16234 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.58■□□□□ 0.89
PDGFRAP16234 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDGFRAP16234 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
PDGFRAP16234 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDGFRAP16234 KRT17P3-201ENST00000420566 1262 ntBASIC20.58■□□□□ 0.89
PDGFRAP16234 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.58■□□□□ 0.89
PDGFRAP16234 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.58■□□□□ 0.89
PDGFRAP16234 AC233263.1-201ENST00000578059 224 ntBASIC20.58■□□□□ 0.89
PDGFRAP16234 AL121829.2-201ENST00000620908 328 ntBASIC20.58■□□□□ 0.89
PDGFRAP16234 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDGFRAP16234 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDGFRAP16234 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDGFRAP16234 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDGFRAP16234 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDGFRAP16234 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.57■□□□□ 0.88
PDGFRAP16234 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
PDGFRAP16234 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.57■□□□□ 0.88
PDGFRAP16234 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PDGFRAP16234 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDGFRAP16234 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDGFRAP16234 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PDGFRAP16234 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDGFRAP16234 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDGFRAP16234 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.57■□□□□ 0.88
PDGFRAP16234 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDGFRAP16234 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms