Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
COL5A2P05997 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.99■■□□□ 1.75
COL5A2P05997 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25.99■■□□□ 1.75
COL5A2P05997 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.99■■□□□ 1.75
COL5A2P05997 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.99■■□□□ 1.75
COL5A2P05997 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 KRT8P8-201ENST00000434750 1448 ntBASIC25.99■■□□□ 1.75
COL5A2P05997 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL5A2P05997 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
COL5A2P05997 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.98■■□□□ 1.75
COL5A2P05997 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.98■■□□□ 1.75
COL5A2P05997 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
COL5A2P05997 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.98■■□□□ 1.75
COL5A2P05997 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL5A2P05997 PRSS44-201ENST00000515154 1146 ntBASIC25.98■■□□□ 1.75
COL5A2P05997 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.98■■□□□ 1.75
COL5A2P05997 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.98■■□□□ 1.75
COL5A2P05997 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
COL5A2P05997 AC012313.10-201ENST00000623509 926 ntBASIC25.98■■□□□ 1.75
COL5A2P05997 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.97■■□□□ 1.75
COL5A2P05997 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 VENTXP5-201ENST00000523979 775 ntBASIC25.97■■□□□ 1.75
COL5A2P05997 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.97■■□□□ 1.75
COL5A2P05997 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL5A2P05997 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.96■■□□□ 1.75
COL5A2P05997 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
COL5A2P05997 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.96■■□□□ 1.75
COL5A2P05997 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.96■■□□□ 1.75
COL5A2P05997 DFFB-212ENST00000625756 649 ntTSL 5 BASIC25.96■■□□□ 1.75
COL5A2P05997 VPS72-207ENST00000640458 689 ntTSL 5 BASIC25.96■■□□□ 1.75
COL5A2P05997 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
COL5A2P05997 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 KRT8P45-201ENST00000414328 1447 ntBASIC25.96■■□□□ 1.75
COL5A2P05997 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC25.96■■□□□ 1.75
COL5A2P05997 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL5A2P05997 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.96■■□□□ 1.75
COL5A2P05997 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL5A2P05997 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL5A2P05997 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
COL5A2P05997 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC25.95■■□□□ 1.74
COL5A2P05997 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.95■■□□□ 1.74
COL5A2P05997 AC112907.2-201ENST00000448639 330 ntBASIC25.95■■□□□ 1.74
COL5A2P05997 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL5A2P05997 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
COL5A2P05997 AL136038.3-201ENST00000561909 1096 ntBASIC25.95■■□□□ 1.74
COL5A2P05997 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC25.95■■□□□ 1.74
COL5A2P05997 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.95■■□□□ 1.74
COL5A2P05997 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.95■■□□□ 1.74
COL5A2P05997 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.95■■□□□ 1.74
COL5A2P05997 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL5A2P05997 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL5A2P05997 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
COL5A2P05997 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC25.94■■□□□ 1.74
COL5A2P05997 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.94■■□□□ 1.74
COL5A2P05997 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.94■■□□□ 1.74
COL5A2P05997 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL5A2P05997 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.94■■□□□ 1.74
COL5A2P05997 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL5A2P05997 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
COL5A2P05997 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL5A2P05997 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL5A2P05997 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
COL5A2P05997 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL5A2P05997 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL5A2P05997 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
COL5A2P05997 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.93■■□□□ 1.74
COL5A2P05997 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL5A2P05997 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms