Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCCBP05166 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.47■□□□□ 0.71
PCCBP05166 TSPY15P-201ENST00000457163 923 ntBASIC19.47■□□□□ 0.71
PCCBP05166 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.47■□□□□ 0.71
PCCBP05166 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.47■□□□□ 0.71
PCCBP05166 AL353708.3-201ENST00000610272 989 ntBASIC19.47■□□□□ 0.71
PCCBP05166 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.47■□□□□ 0.71
PCCBP05166 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCCBP05166 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.47■□□□□ 0.71
PCCBP05166 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.47■□□□□ 0.71
PCCBP05166 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCCBP05166 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCCBP05166 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCCBP05166 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.47■□□□□ 0.71
PCCBP05166 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCCBP05166 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.46■□□□□ 0.71
PCCBP05166 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.46■□□□□ 0.71
PCCBP05166 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
PCCBP05166 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCCBP05166 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.46■□□□□ 0.71
PCCBP05166 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.46■□□□□ 0.71
PCCBP05166 AL355075.4-201ENST00000554988 638 ntBASIC19.46■□□□□ 0.71
PCCBP05166 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.46■□□□□ 0.71
PCCBP05166 AP003071.4-201ENST00000562276 1284 ntBASIC19.46■□□□□ 0.71
PCCBP05166 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.46■□□□□ 0.71
PCCBP05166 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.46■□□□□ 0.71
PCCBP05166 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCCBP05166 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PCCBP05166 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.46■□□□□ 0.71
PCCBP05166 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCCBP05166 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.45■□□□□ 0.7
PCCBP05166 TMEM179-206ENST00000616017 1645 ntBASIC19.45■□□□□ 0.7
PCCBP05166 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.45■□□□□ 0.7
PCCBP05166 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.45■□□□□ 0.7
PCCBP05166 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.45■□□□□ 0.7
PCCBP05166 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.45■□□□□ 0.7
PCCBP05166 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.45■□□□□ 0.7
PCCBP05166 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCCBP05166 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCCBP05166 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 KRT16P1-201ENST00000399124 1418 ntBASIC19.44■□□□□ 0.7
PCCBP05166 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCCBP05166 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCCBP05166 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 KSR1P1-201ENST00000446298 240 ntBASIC19.44■□□□□ 0.7
PCCBP05166 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.44■□□□□ 0.7
PCCBP05166 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 BX088651.1-201ENST00000540551 451 ntBASIC19.44■□□□□ 0.7
PCCBP05166 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.44■□□□□ 0.7
PCCBP05166 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.44■□□□□ 0.7
PCCBP05166 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.44■□□□□ 0.7
PCCBP05166 AC073912.3-201ENST00000624414 853 ntBASIC19.44■□□□□ 0.7
PCCBP05166 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.44■□□□□ 0.7
PCCBP05166 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PCCBP05166 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCCBP05166 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCCBP05166 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.44■□□□□ 0.7
PCCBP05166 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCCBP05166 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
PCCBP05166 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCCBP05166 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms