Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.72■■□□□ 1.39
COL1A1P02452 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 Z85996.1-201ENST00000494644 937 ntBASIC23.72■■□□□ 1.39
COL1A1P02452 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.72■■□□□ 1.39
COL1A1P02452 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.72■■□□□ 1.39
COL1A1P02452 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A1P02452 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A1P02452 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A1P02452 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.71■■□□□ 1.39
COL1A1P02452 DUX4L26-201ENST00000489078 1255 ntBASIC23.71■■□□□ 1.39
COL1A1P02452 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A1P02452 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.71■■□□□ 1.39
COL1A1P02452 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.71■■□□□ 1.39
COL1A1P02452 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A1P02452 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A1P02452 AC099778.1-201ENST00000568593 1911 ntBASIC23.71■■□□□ 1.39
COL1A1P02452 AL157384.1-201ENST00000445995 2473 ntBASIC23.71■■□□□ 1.39
COL1A1P02452 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A1P02452 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A1P02452 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A1P02452 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A1P02452 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A1P02452 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.7■■□□□ 1.38
COL1A1P02452 AC008040.2-201ENST00000461049 708 ntBASIC23.7■■□□□ 1.38
COL1A1P02452 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.7■■□□□ 1.38
COL1A1P02452 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL1A1P02452 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
COL1A1P02452 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A1P02452 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A1P02452 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A1P02452 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.7■■□□□ 1.38
COL1A1P02452 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.7■■□□□ 1.38
COL1A1P02452 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.7■■□□□ 1.38
COL1A1P02452 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL1A1P02452 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.69■■□□□ 1.38
COL1A1P02452 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.69■■□□□ 1.38
COL1A1P02452 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.69■■□□□ 1.38
COL1A1P02452 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL1A1P02452 AP005242.2-201ENST00000580065 1175 ntBASIC23.69■■□□□ 1.38
COL1A1P02452 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.69■■□□□ 1.38
COL1A1P02452 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.69■■□□□ 1.38
COL1A1P02452 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COL1A1P02452 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A1P02452 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL1A1P02452 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.68■■□□□ 1.38
COL1A1P02452 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.68■■□□□ 1.38
COL1A1P02452 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
COL1A1P02452 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 KRT8P8-201ENST00000434750 1448 ntBASIC23.68■■□□□ 1.38
COL1A1P02452 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.68■■□□□ 1.38
COL1A1P02452 FSCN1P1-201ENST00000568912 1481 ntBASIC23.68■■□□□ 1.38
COL1A1P02452 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.68■■□□□ 1.38
COL1A1P02452 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A1P02452 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.68■■□□□ 1.38
COL1A1P02452 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.68■■□□□ 1.38
COL1A1P02452 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.68■■□□□ 1.38
COL1A1P02452 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL1A1P02452 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
COL1A1P02452 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
COL1A1P02452 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
COL1A1P02452 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
COL1A1P02452 LINC01465-201ENST00000408887 1940 ntBASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms