Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE6O95741 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 SMG8-203ENST00000578922 2178 ntBASIC19.28■□□□□ 0.68
CPNE6O95741 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE6O95741 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPNE6O95741 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE6O95741 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CPNE6O95741 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE6O95741 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE6O95741 LINC01023-201ENST00000606054 436 ntBASIC19.28■□□□□ 0.68
CPNE6O95741 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.28■□□□□ 0.68
CPNE6O95741 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPNE6O95741 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE6O95741 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPNE6O95741 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE6O95741 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE6O95741 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE6O95741 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE6O95741 AL353807.1-201ENST00000427475 662 ntBASIC19.27■□□□□ 0.68
CPNE6O95741 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE6O95741 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE6O95741 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.27■□□□□ 0.68
CPNE6O95741 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPNE6O95741 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.27■□□□□ 0.68
CPNE6O95741 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE6O95741 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
CPNE6O95741 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE6O95741 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE6O95741 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CPNE6O95741 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE6O95741 BX323043.1-201ENST00000641006 1765 ntBASIC19.27■□□□□ 0.67
CPNE6O95741 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE6O95741 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE6O95741 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE6O95741 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE6O95741 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE6O95741 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CPNE6O95741 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE6O95741 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE6O95741 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE6O95741 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE6O95741 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.26■□□□□ 0.67
CPNE6O95741 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE6O95741 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CPNE6O95741 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPNE6O95741 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE6O95741 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE6O95741 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE6O95741 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE6O95741 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE6O95741 AC018445.3-201ENST00000624177 1945 ntBASIC19.25■□□□□ 0.67
CPNE6O95741 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE6O95741 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE6O95741 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE6O95741 AC004264.1-201ENST00000608354 794 ntBASIC19.25■□□□□ 0.67
CPNE6O95741 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE6O95741 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE6O95741 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE6O95741 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE6O95741 PTBP1P-201ENST00000554374 1601 ntBASIC19.25■□□□□ 0.67
CPNE6O95741 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE6O95741 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
CPNE6O95741 HTR7P1-201ENST00000538670 1336 ntBASIC19.25■□□□□ 0.67
CPNE6O95741 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms