Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA3O95167 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA3O95167 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NDUFA3O95167 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFA3O95167 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDUFA3O95167 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.69■□□□□ 0.1
NDUFA3O95167 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.69■□□□□ 0.1
NDUFA3O95167 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.69■□□□□ 0.1
NDUFA3O95167 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.69■□□□□ 0.1
NDUFA3O95167 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
NDUFA3O95167 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.69■□□□□ 0.1
NDUFA3O95167 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFA3O95167 TREX1-205ENST00000625293 1783 ntBASIC15.69■□□□□ 0.1
NDUFA3O95167 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.69■□□□□ 0.1
NDUFA3O95167 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA3O95167 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NDUFA3O95167 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFA3O95167 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NDUFA3O95167 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA3O95167 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NDUFA3O95167 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA3O95167 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.68■□□□□ 0.1
NDUFA3O95167 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.68■□□□□ 0.1
NDUFA3O95167 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFA3O95167 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFA3O95167 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
NDUFA3O95167 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
NDUFA3O95167 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
NDUFA3O95167 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFA3O95167 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NDUFA3O95167 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NDUFA3O95167 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
NDUFA3O95167 KRT17P3-201ENST00000420566 1262 ntBASIC15.67■□□□□ 0.1
NDUFA3O95167 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFA3O95167 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFA3O95167 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFA3O95167 CD99P1-205ENST00000527459 561 ntBASIC15.67■□□□□ 0.1
NDUFA3O95167 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.67■□□□□ 0.1
NDUFA3O95167 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFA3O95167 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms