Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 PHGDH-210ENST00000641115 1638 ntBASIC19.42■□□□□ 0.7
SUPT3HO75486 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.42■□□□□ 0.7
SUPT3HO75486 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUPT3HO75486 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SUPT3HO75486 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.41■□□□□ 0.7
SUPT3HO75486 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SUPT3HO75486 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SUPT3HO75486 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 MIR935-201ENST00000401179 91 ntBASIC19.41■□□□□ 0.7
SUPT3HO75486 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.41■□□□□ 0.7
SUPT3HO75486 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.41■□□□□ 0.7
SUPT3HO75486 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.41■□□□□ 0.7
SUPT3HO75486 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.41■□□□□ 0.7
SUPT3HO75486 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.41■□□□□ 0.7
SUPT3HO75486 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUPT3HO75486 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
SUPT3HO75486 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.41■□□□□ 0.7
SUPT3HO75486 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.4■□□□□ 0.7
SUPT3HO75486 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 AC026185.1-201ENST00000445748 174 ntBASIC19.4■□□□□ 0.7
SUPT3HO75486 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUPT3HO75486 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SUPT3HO75486 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SUPT3HO75486 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.39■□□□□ 0.7
SUPT3HO75486 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SUPT3HO75486 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SUPT3HO75486 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SUPT3HO75486 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.7
SUPT3HO75486 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SUPT3HO75486 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SUPT3HO75486 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SUPT3HO75486 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SUPT3HO75486 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.39■□□□□ 0.69
SUPT3HO75486 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.39■□□□□ 0.69
SUPT3HO75486 BX276092.2-201ENST00000417668 665 ntBASIC19.39■□□□□ 0.69
SUPT3HO75486 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.39■□□□□ 0.69
SUPT3HO75486 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SUPT3HO75486 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.39■□□□□ 0.69
SUPT3HO75486 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.39■□□□□ 0.69
SUPT3HO75486 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUPT3HO75486 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SUPT3HO75486 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.38■□□□□ 0.69
SUPT3HO75486 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUPT3HO75486 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUPT3HO75486 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SUPT3HO75486 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUPT3HO75486 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms