Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM3O75382 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM3O75382 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRIM3O75382 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM3O75382 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM3O75382 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRIM3O75382 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM3O75382 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
TRIM3O75382 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM3O75382 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM3O75382 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM3O75382 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM3O75382 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM3O75382 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.27■□□□□ 0.51
TRIM3O75382 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
TRIM3O75382 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM3O75382 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM3O75382 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM3O75382 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM3O75382 HLA-G-202ENST00000376815 851 ntBASIC18.26■□□□□ 0.51
TRIM3O75382 HLA-G-203ENST00000376818 1127 ntBASIC18.26■□□□□ 0.51
TRIM3O75382 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 GCSHP5-201ENST00000443090 522 ntBASIC18.26■□□□□ 0.51
TRIM3O75382 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRIM3O75382 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM3O75382 AL031963.3-201ENST00000606441 850 ntBASIC18.26■□□□□ 0.51
TRIM3O75382 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM3O75382 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM3O75382 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TRIM3O75382 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM3O75382 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM3O75382 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM3O75382 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
TRIM3O75382 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 KRT8P20-201ENST00000423953 1409 ntBASIC18.25■□□□□ 0.51
TRIM3O75382 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
TRIM3O75382 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM3O75382 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM3O75382 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 RN7SL471P-201ENST00000580476 299 ntBASIC18.25■□□□□ 0.51
TRIM3O75382 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM3O75382 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM3O75382 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM3O75382 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM3O75382 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM3O75382 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM3O75382 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM3O75382 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM3O75382 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM3O75382 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM3O75382 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM3O75382 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM3O75382 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
TRIM3O75382 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms