Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT3O75175 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 AP006294.2-201ENST00000641667 209 ntBASIC18.99■□□□□ 0.63
CNOT3O75175 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT3O75175 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNOT3O75175 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT3O75175 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNOT3O75175 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNOT3O75175 AL596275.1-201ENST00000423464 877 ntBASIC18.98■□□□□ 0.63
CNOT3O75175 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT3O75175 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CNOT3O75175 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.98■□□□□ 0.63
CNOT3O75175 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNOT3O75175 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 MTDHP1-201ENST00000605323 784 ntBASIC18.98■□□□□ 0.63
CNOT3O75175 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT3O75175 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT3O75175 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT3O75175 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT3O75175 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CNOT3O75175 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 PCDHAC2-203ENST00000615316 3011 ntBASIC18.97■□□□□ 0.63
CNOT3O75175 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT3O75175 UBE2SP1-201ENST00000450587 669 ntBASIC18.97■□□□□ 0.63
CNOT3O75175 RPS2P4-201ENST00000476944 856 ntBASIC18.97■□□□□ 0.63
CNOT3O75175 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT3O75175 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT3O75175 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.97■□□□□ 0.63
CNOT3O75175 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT3O75175 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT3O75175 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT3O75175 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT3O75175 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CNOT3O75175 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT3O75175 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.96■□□□□ 0.63
CNOT3O75175 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT3O75175 AC008550.1-201ENST00000511500 884 ntBASIC18.96■□□□□ 0.63
CNOT3O75175 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNOT3O75175 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.96■□□□□ 0.63
CNOT3O75175 FAM197Y4-202ENST00000622692 608 ntBASIC18.96■□□□□ 0.63
CNOT3O75175 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms