Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN1O60925 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.6■□□□□ 0.41
PFDN1O60925 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PFDN1O60925 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN1O60925 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 AC093536.1-201ENST00000569153 554 ntBASIC17.6■□□□□ 0.41
PFDN1O60925 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.6■□□□□ 0.41
PFDN1O60925 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN1O60925 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.6■□□□□ 0.41
PFDN1O60925 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN1O60925 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.6■□□□□ 0.41
PFDN1O60925 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PFDN1O60925 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PFDN1O60925 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PFDN1O60925 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.59■□□□□ 0.41
PFDN1O60925 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PFDN1O60925 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PFDN1O60925 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 WIZP1-201ENST00000531444 2299 ntBASIC17.59■□□□□ 0.41
PFDN1O60925 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.59■□□□□ 0.41
PFDN1O60925 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.59■□□□□ 0.41
PFDN1O60925 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PFDN1O60925 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PFDN1O60925 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PFDN1O60925 AC092720.2-201ENST00000602388 1665 ntBASIC17.58■□□□□ 0.41
PFDN1O60925 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.58■□□□□ 0.41
PFDN1O60925 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PFDN1O60925 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.58■□□□□ 0.41
PFDN1O60925 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
PFDN1O60925 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PFDN1O60925 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PFDN1O60925 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PFDN1O60925 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 AL162393.1-201ENST00000437852 946 ntBASIC17.58■□□□□ 0.4
PFDN1O60925 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PFDN1O60925 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.58■□□□□ 0.4
PFDN1O60925 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.58■□□□□ 0.4
PFDN1O60925 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.58■□□□□ 0.4
PFDN1O60925 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.58■□□□□ 0.4
PFDN1O60925 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.58■□□□□ 0.4
PFDN1O60925 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PFDN1O60925 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.58■□□□□ 0.4
PFDN1O60925 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PFDN1O60925 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PFDN1O60925 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms